EGAF00004913385 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913385
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14437366
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	43543	0.30159933605617534	No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	28721	0.19893517972738242	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	27344	0.1893974288661796	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	24211	0.16769679455379882	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	19263	0.13342461498863434	No Hit
CCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	17610	0.12197515807246279	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	16756	0.11605995165600153	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	16596	0.11495171626181673	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	15898	0.11011703935468561	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	15313	0.1060650536946975	No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC	15263	0.10571873013401475	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	14967	0.1036684946547729	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACCTA	1185	48.971592	1
AATACCG	4085	48.274338	8
AGTACGA	9825	48.270416	9
ATACCGG	4070	48.22128	9
GTAGCAA	31450	48.0949	9
CAGTACG	10045	47.068836	8
AGTAGCA	34235	44.12457	8
GTACGGT	1925	42.1788	2
TAGTAGC	36520	41.084938	7
TTCCGAC	6110	41.063225	8
CGGTGAA	11770	40.52817	5
GCTAGTA	3835	40.140186	5
GATAGTA	5620	39.733913	5
GCGGTAC	6435	39.648663	4
GTACACC	8720	38.576073	7
TTTCCGA	6710	37.88197	7
ATAGTAG	7145	37.171177	6
TCAGTAC	12930	36.855618	7
CGGTACA	7405	35.417164	5
GGTACAC	8460	35.324577	6