FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004913425

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004913425
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9702295
Sequences flagged as poor quality0
Sequence length125
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG162510.16749645315876296No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA122520.12627940090463133No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC111350.11476666087765833No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)