EGAF00004913446 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913446
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19097095
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	136737	0.7160094244700569	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	60000	0.3141839112179104	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	57759	0.30244914213392143	No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG	38823	0.2032926997535489	No Hit
AGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCCCGAA	37316	0.19540144718345906	No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT	34746	0.1819439029862919	No Hit
ACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCT	28031	0.1467814869224874	No Hit
GAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTAT	22110	0.11577677128379997	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	9475	63.26137	4
GCGACAT	9690	61.813744	5
CTGCGAC	9980	59.917496	3
GCTGCGA	10765	55.636463	2
CGACATC	12630	47.53762	6
GGCTGCG	13595	44.945156	1
TGGCTAG	39875	37.520473	4
CTAGGCG	40415	36.50502	7
GCTAGGC	41770	35.50276	6
TAGGCGG	42155	34.99823	8
GGCTAGG	42905	34.81821	5
GGCTGGC	42760	34.746517	1
CTGGCTA	44070	34.110584	3
GCTGGCT	44930	33.436535	2
GCGCGGT	12895	31.752625	6
GACATCT	20100	30.03608	7
ACATCTG	20910	29.099722	8
GGGCGCG	14130	28.975008	4
ACCCGAC	4595	28.425339	3
CGCGGTG	14550	28.238838	7