EGAF00004913447 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913447
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19097095
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	48576	0.2543632945220203	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	33423	0.17501614774393698	No Hit
GGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTGA	30608	0.16027568590929667	No Hit
CCTCTGTCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	25670	0.13441835001606264	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGA	23601	0.12358424147756505	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCCGACC	14685	54.06716	9
TTCCGAC	14775	53.705677	8
TGTCGGG	5610	51.130703	5
TTTCCGA	17075	46.69414	7
CTGTCGG	6195	45.229027	4
GTTCCGT	3455	43.287567	1
GTTTCCG	15655	42.73947	6
TCTGTCG	6615	41.638218	3
CGTTTCC	15580	41.27232	5
CCGTTTC	15405	40.84705	4
CGGGGAT	32225	40.494408	8
GTCGGGG	7400	40.49197	6
TCGGGGA	32500	40.239536	7
TCACCCC	47065	39.13749	9
TCCGTTT	15715	37.04845	3
GCTCCGT	11180	35.078335	1
CTCCGTT	12795	34.138447	2
GTTCACC	54385	33.70393	7
ATAGCGC	29600	33.223446	94-95
TTCACCC	55785	32.892048	8