FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004913469

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004913469
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21126592
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGACC56800.048.737379
TTCCGAC62050.044.842478
CGGGGAT136350.037.8188558
TGTCGGG33500.036.430075
TCGGGGA142800.036.310077
GTCCCGT29600.036.248561
TTTCCGA81350.034.9040877
GTTTCCG72150.033.8924146
CCCGTTA26950.033.3006863
CTCCGTT73650.033.197662
CCGTTTC90600.033.0716174
GTTCCGT29800.032.8189741
CCCCGTT57350.032.6163832
TCCGTTT96500.032.082663
GCTCCGT64700.032.066471
GCCCCGT37350.031.7777711
ATAGCGC135450.031.3830794-95
CGTTTCC83250.031.3725765
CCGATCG143750.031.22811186-87
GTTCACC255600.031.1162037
Produced by FastQC (version 0.11.5)