EGAF00004913476 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913476
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21772966
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	109044	0.5008229012069371	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	65547	0.30104763861754064	No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT	56069	0.25751659190576054	No Hit
ACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCT	55584	0.25528905891829345	No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG	55075	0.2529512974943331	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	46285	0.21258013262869194	No Hit
GAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTAT	32374	0.1486889751263103	No Hit
AGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCCCGAA	27273	0.12526083951998088	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	8315	58.836887	4
GCGACAT	8950	54.682095	5
CTGCGAC	9995	49.232975	3
GCTGCGA	11125	44.561615	2
CGACATC	11730	41.69576	6
TGGCTAG	36930	34.27088	4
ACCCGAC	5265	33.95377	3
GGCTGCG	14785	33.93395	1
CTAGGCG	38025	32.830235	7
GCGCGGT	17845	32.14423	6
TAGGCGG	39530	31.544275	8
GCTAGGC	40250	31.027195	6
CTGGCTA	42365	30.08764	3
GGCTAGG	42045	29.947634	5
GGGCGCG	19735	29.270874	4
GGCTGGC	42995	29.017778	1
CGCGGTG	19840	28.911983	7
CCCGACT	6215	28.8401	4
CCGACTC	6255	28.258339	5
GCTGGCT	45015	28.071398	2