EGAF00004913484 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913484
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19760163
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	103695	0.5247679384021275	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	66294	0.3354931839378046	No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT	41668	0.21086870589073584	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	37611	0.19033749873419567	No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG	37159	0.1880500682104697	No Hit
GAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTAT	25413	0.12860723871559157	No Hit
AGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCCCGAA	25171	0.1273825524617383	No Hit
ACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCT	24515	0.12406274179013604	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	10245	66.29642	4
GCGACAT	10455	64.90107	5
CTGCGAC	11690	58.79272	3
GCTGCGA	12100	56.29212	2
CGACATC	12875	52.745823	6
GGCTGCG	15145	45.533066	1
CTAGGCG	36100	34.281937	7
TAGGCGG	37490	32.93488	8
GACATCT	20765	32.864193	7
TGGCTAG	38640	32.572464	4
GCTAGGC	38400	32.302876	6
GGCTAGG	40300	31.056925	5
GCGCGGT	12255	30.962265	6
ACATCTG	22640	30.22635	8
GGCTGGC	41780	29.901203	1
CTGGCTA	43015	29.149065	3
GCTGGCT	44150	28.366785	2
CGCGGTG	13760	27.644724	7
GGGCGCG	13740	27.5357	4
ACCCGAC	3515	26.773775	3