FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004913516

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004913516
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24082205
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG707620.29383521982310173No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC564720.23449679960784323No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT403580.16758432211668325No Hit
GTATTCGTACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGCTCCA322440.13389139408123135No Hit
GGCAGTATGATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGAT304010.1262384403753726No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG270960.11251461400648322No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG265520.11025568464349506No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC243720.1012033574168146No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC243690.10119090008576873No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)