EGAF00004913578 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913578
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17483944
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	92887	0.5312702900443973	No Hit
GGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCC	82404	0.47131242241453075	No Hit
CAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGG	58124	0.3324421537840661	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	33024	0.1888818678440059	No Hit
CAGCGGAGGAGAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAA	30354	0.17361071392129832	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	28042	0.1603871529215605	No Hit
CGGAGAAGCCGGCGGGAGCCCCGGGGAGAGTTCTCTTTTCTTTGTGAAGG	26011	0.14877078078035483	No Hit
GGCGTGGAGCCGGGCGTGGAATGCGAGTGCCTAGTGGGCCACTTTTGGTA	22251	0.12726533555586772	No Hit
AACACGGACCAAGGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAA	22043	0.12607567262855568	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCAGACG	10060	56.298233	5
CAGACGT	10560	53.8575	6
AGACGTG	11075	51.267403	7
AGGGGCG	17655	47.31322	7
GGGGCGA	17675	47.206146	8
ATAGGGG	18685	44.704853	5
TATAGGG	19120	43.53892	4
GGTATAG	19240	43.34319	2
GTATAGG	19570	42.392338	3
TAGGGGC	20380	40.82407	6
GGGTATA	20840	40.373886	1
GACGTGG	14535	39.291954	8
ACGTGGC	15210	37.392296	9
GGGCGAA	22960	37.207798	9
AGCCGGC	7610	34.593876	7
GATCAGA	16715	33.94011	3
GGTAGTA	28980	33.19388	5
CGAACCA	12995	33.162006	24-25
GAAGCCG	8050	32.820694	5
GTAGTAG	29820	32.656693	6