EGAF00004913630 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913630
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16966242
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	190952	1.1254820012587348	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	177146	1.0441086482203896	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	100667	0.5933370513045847	No Hit
CCGCCACTCCGGATTCGGGGATCTGAACCCGACTCCCTTTCGATCGGCCG	73387	0.4325471722023062	No Hit
CTCCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACT	61824	0.36439418935554496	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	56948	0.33565476668315825	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	44021	0.2594622898812831	No Hit
AACTGCTTGGACGCGGATATCCAATACCGCGCTTACCCTATCCTCCTGCG	38018	0.22408026479876922	No Hit
AAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCAC	32526	0.1917101029208472	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	31532	0.1858514101119152	No Hit
CGGGGCAAGTTTCGTGCTTAGATGCTTTCAGCACTTATCTCTTCCGCATT	30020	0.17693959569832848	No Hit
AACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAG	26686	0.15728880915408375	No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	23854	0.1405968393000642	No Hit
AAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGA	23401	0.1379268314102793	No Hit
CAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAA	22382	0.13192078717255123	No Hit
ACCCGCCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCA	19718	0.11621901892004134	No Hit
GCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGGAACGGCGCTCGCCC	19669	0.11593021011960102	No Hit
TGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCA	19391	0.11429166223138865	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	6060	74.77147	4
GCGACAT	6175	73.534096	5
CTGCGAC	6965	65.465164	3
GCTGCGA	7335	62.55105	2
TTGGACG	6845	57.246246	7
CGACTCC	37790	52.66276	6
GGCTGCG	8950	51.438114	1
GGACGCG	7615	51.144955	9
CCGACTC	38960	51.08141	5
GCTCCCG	34305	50.549976	8
CCCGACT	39800	50.396244	4
ACCCGAC	39635	50.354385	3
GTTTCGT	6460	48.819622	9
ACTCCCT	41495	48.075085	8
AGTTTCG	6625	47.963047	8
GACTCCC	43420	45.82337	7
AACCCGA	44090	45.65396	2
CTCCCGC	37945	45.399582	9
CCGGGGC	38325	45.19743	3
GGGCTCC	38545	45.0387	6