EGAF00004913674 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913674
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8689592
Sequences flagged as poor quality	0
Sequence length	125
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	67445	0.7761584203262938	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34341	0.395196920637931	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28029	0.3225582973285742	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	18107	0.20837572120762402	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12363	0.14227365335449582	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	12057	0.13875219918265436	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	10804	0.12433264991037554	No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC	10622	0.12223819023954173	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	10200	0.11738180572804799	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	10159	0.11690997690110191	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	9047	0.1041130584727108	No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG	8951	0.10300828853644682	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	7635	88.086914	1
GTATCAA	25740	70.15344	1
ATCAACG	33800	54.03774	3
TCAACGC	34370	53.176197	4
CAACGCA	34375	53.151146	5
AACGCAG	36430	50.20757	6
ACGCAGA	39755	46.03828	7
CGCAGAG	39975	45.82798	8
GCAGCGC	1630	43.072884	8
GCAGAGT	43050	42.55455	9
TATCAAC	43205	42.084213	2
GCTCTAG	1420	40.656067	1
TGCAGCG	1750	39.78069	7
TGGTCCT	3320	30.8324	5
AGAGTAC	48160	30.225136	10-11
TAGATGG	2785	27.987919	7
TAGCGTG	810	27.913103	9
CAGAGTA	46160	27.255327	10-11
ACGGGAC	1030	27.156738	3
CTAGCCT	6560	26.853745	4