EGAF00004913675 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913675
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8689592
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	19403	0.2232901153471878	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	12492	0.14375818795635054	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	11693	0.1345632798409868	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	11520	0.13257239235167773	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	9854	0.11340003074942989	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	9735	0.11203057634926934	No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC	9317	0.10722022391845323	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	9222	0.10612696200235869	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	9143	0.10521782840897478	No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG	9011	0.10369876974661181	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	2640	47.833054	1
CAACGCA	7255	46.899864	5
GCTCTAG	1570	46.286713	1
ACGCAGA	7400	45.990948	7
CGCAGAG	7430	45.727802	8
ATCAACG	7575	44.848606	3
TCAACGC	7760	43.918587	4
GTATCAA	8635	41.871883	1
GCAGCGC	1285	41.674698	8
AACGCAG	8620	39.68726	6
GCAGAGT	8835	38.460075	9
TGCAGCG	1525	34.33372	7
TGGTCCT	3765	32.86331	5
ACGGGAC	860	28.36488	3
GTCGTGC	990	28.278662	1
CTAGCCT	7080	25.958563	4
TCTGTCG	805	25.131367	8
GCCTTTC	5740	24.981192	7
GAGTACG	8720	24.844803	12-13
AATGCGT	4395	24.09637	6