FastQCFastQC Report
Wed 11 May 2022
EGAF00004913677

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004913677
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28947257
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG494980.170993749079576No Hit
CCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG428710.14810038823367616No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGA315090.1088496916996315No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)