EGAF00004913686 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913686
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23330128
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	119266	0.5112102256790019	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	83145	0.3563846713571396	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	42906	0.18390812086414612	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	40183	0.17223651751932093	No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT	35821	0.1535396633914739	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	34648	0.14851182985365532	No Hit
ACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCT	28439	0.12189817389771714	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	27357	0.11726039394211639	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	25977	0.11134529566232984	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	25878	0.11092095165530168	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	11465	72.7579	4
GCGACAT	12540	66.71338	5
CTGCGAC	12755	65.31902	3
GCTGCGA	14105	59.134644	2
GGCTGCG	18455	45.85991	1
CGACATC	21105	39.57076	6
ACCCGAC	11305	38.31906	3
CCGACTC	12070	35.619877	5
CCCGACT	12265	35.439144	4
ACTCGGG	21590	33.67612	1
CTAGGCG	38515	33.660027	7
TGGCTAG	39735	33.08001	4
TAGGCGG	39250	32.957085	8
ACATCTG	25680	32.854042	8
CGACTCC	13250	32.339367	6
GCTAGGC	40880	31.828928	6
GGCTAGG	42075	31.241804	5
CTCGGGA	23495	31.053198	2
GACATCT	27645	30.553152	7
GACTCCC	14375	30.13893	7