EGAF00004913697 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913697
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21836428
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	57482	0.2632390242579968	No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	43580	0.19957476561642773	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	38842	0.17787707769787256	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	31726	0.1452893302879024	No Hit
CCTCTGTCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	30490	0.13962906387436627	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGA	26701	0.12227732484452127	No Hit
GGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTGA	24833	0.11372281217422557	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	22305	0.10214582714718726	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTCCGAC	16375	55.77108	8
TCCGACC	17900	50.993103	9
TGTCGGG	6455	50.911507	5
TTTCCGA	19370	47.2957	7
GTTCCGT	4080	47.24984	1
CGTTTCC	16190	45.935776	5
GTTTCCG	17215	45.601685	6
CCGTTTC	16490	44.322487	4
GTAGCAA	37790	43.444378	9
TCTGTCG	7415	43.035553	3
CGGGGAT	36380	42.922024	8
GCCCCGT	6370	41.817482	1
TCCGTTT	16945	41.75553	3
TCGGGGA	37615	41.589294	7
CTGTCGG	8080	40.37862	4
TCACCCC	50555	40.252956	9
AGTAGCA	40855	40.127	8
TAGTAGC	42435	38.275505	7
GTCGGGG	9195	37.70389	6
GCTCCGT	13255	37.11201	1