EGAF00004913717 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913717
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12774240
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	42157	0.3300157191347587	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	28268	0.22128909430228333	No Hit
GGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTGA	26344	0.20622753290998136	No Hit
CCTCTGTCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	22876	0.1790791467829006	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15976	0.1250641916857676	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGA	15883	0.1243361640301106	No Hit
CGGCCCTCGCGCGTCCTTCCTCCTCGCTCCTCCGCACGGGTCGACCTGCA	15510	0.12141622515312066	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	14913	0.11674275729906436	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTCCGAC	10295	54.1578	8
TCCGACC	10665	52.250088	9
TGTCGGG	5120	50.14525	5
TCTGTCG	5025	49.947712	3
TTTCCGA	12130	46.34983	7
GTAGCAA	18195	45.861855	9
TAGTAGC	18740	44.788124	7
CGTTTCC	10520	43.884747	5
CTGTCGG	5930	43.1338	4
CCGTTTC	10480	42.296158	4
AGTAGCA	19930	41.857044	8
GTTTCCG	11745	41.59922	6
TCCGTTT	9990	40.631813	3
CGGGGAT	28060	40.479206	8
TCGGGGA	28150	40.447067	7
TCGCGCG	8385	38.049953	7
CAGTACG	4715	37.984333	8
CTCCGTT	8920	37.950603	2
TCACCCC	29525	37.795383	9
GCTCCGT	8490	36.540215	1