EGAF00004913736 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913736
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13504851
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	46588	0.3449723362368085	No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	41638	0.3083188403929818	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	35862	0.2655490238285487	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	35620	0.2637570751428505	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	34773	0.2574852547429068	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	29667	0.21967661842400188	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	27360	0.20259386793678807	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	17581	0.1301828505919836	No Hit
GCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGGAACGGCGCTCGCCC	16238	0.12023827586102209	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	15253	0.1129446004254323	No Hit
GGCCCACTAGGCACTCGCATTCCACGCCCGGCTCCACGCCAGCGAGCCGG	14145	0.10474014115372321	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	4855	60.46988	4
GCGACAT	5300	55.297325	5
CTGCGAC	5635	52.27189	3
GCTGCGA	6600	44.99085	2
ACCCGAC	9480	36.88416	3
GGCTGCG	8380	35.83225	1
CCCGACT	9860	35.460167	4
CCGACTC	9930	35.302216	5
GCTCGCG	1880	35.116528	9
CGACTCC	10095	34.581615	6
AACCCGA	11090	31.702118	2
CTCGACC	2150	30.936964	2
GACTCCC	11965	29.533497	7
CTAGGCG	14650	29.21069	7
CCTCGAC	2295	28.776176	1
TAGGCGG	15185	28.150255	8
ACTCCCT	12945	27.444427	8
GAACCCG	13415	27.093912	1
CTCGCGT	1220	26.862442	10-11
TGGCTAG	16785	26.122831	4