EGAF00004913742 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913742
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11881734
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	50052	0.4212516455931432	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	31577	0.26576087295002565	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	29350	0.2470178174330447	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	17318	0.14575313670546738	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	16801	0.1414019199554543	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	16798	0.14137667111551228	No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG	14420	0.1213627573214482	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	13271	0.1116924516236435	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	4795	61.225224	4
GCGACAT	4850	61.112427	5
CTGCGAC	5380	54.836884	3
GCTGCGA	5855	50.31122	2
GGCTGCG	7365	40.191273	1
CGACATC	7690	38.294106	6
ACCCGAC	4080	35.281406	3
CTAGGCG	15290	34.72867	7
TAGGCGG	15560	34.187096	8
GCTAGGC	16545	32.324974	6
CCGACTC	4475	31.949211	5
GGCTAGG	17255	31.326654	5
TGGCTAG	17585	31.120077	4
GCGCGGT	4540	31.071854	6
CCCGACT	4625	30.916142	4
AACCCGA	4680	30.86226	2
CGACTCC	4760	30.633598	6
GACATCT	10705	27.77419	7
GGCTGGC	19325	27.709002	1
ACCGACT	6600	27.633831	7