EGAF00004913759 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913759
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11141957
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	49461	0.4439166297267168	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	30660	0.2751760754416841	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	23245	0.20862582758127676	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	22054	0.19793650253721135	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	14957	0.13424033138882155	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	14620	0.13121572808080303	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	14011	0.1257499019247696	No Hit
GGTACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	12193	0.10943319921266972	No Hit
GGCATGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	11913	0.10692017569265434	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	11789	0.10580726527664754	No Hit
GGCCGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGCG	11520	0.10339296768063276	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTACGGT	2145	64.81355	2
CGCGATA	375	62.005665	3
TACGGTG	2405	58.206768	3
GGTACGG	2600	54.566154	1
GCCCCGT	2755	51.49619	1
GCGCGGT	2350	49.871746	2
CGCGGTG	2530	46.89063	3
ATACCGG	1985	46.812256	9
GTAGCAA	34355	45.13928	9
AGTAGCA	34875	44.398266	8
CCGGTGC	2675	44.171497	3
TAGTAGC	34980	44.170116	7
GTGCTCT	21815	43.48664	6
GCTCTGA	25330	42.61788	8
GGCGGTA	6540	42.37421	3
AATACCG	2235	41.57599	8
GTACACC	8165	41.109398	7
AGTGCTC	16960	40.71696	5
CGGTGAA	18655	40.678467	5
CCGTGCT	2655	40.19405	4