EGAF00004913788 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913788
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7111947
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	62963	0.8853131217091467	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	32146	0.45199999381322725	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22659	0.3186047365088632	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17511	0.24621949516777897	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	14580	0.2050071520499239	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	11453	0.16103888288256368	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	11292	0.15877508648475586	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	10923	0.15358663387114668	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	8909	0.12526808762776215	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	8663	0.12180911921868935	No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC	7780	0.10939339114872482	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	8610	88.41034	1
GTATCAA	24595	68.820595	1
GCGTAAG	460	68.57308	1
GCGTACT	510	58.349277	1
GCGTAAC	190	56.383827	1
ATCAACG	30280	55.661865	3
TCAACGC	30675	55.371944	4
CAACGCA	30745	55.323303	5
GCTCTAG	1485	54.90726	1
AACGCAG	32210	52.924103	6
GCGTATG	295	52.455013	1
ACGCAGA	34405	49.511276	7
CGCAGAG	34865	48.892166	8
CGTACTT	605	47.219185	2
GCAGAGT	36840	46.254898	9
TATCAAC	36430	46.233826	2
GTCTCGC	1050	43.07844	1
TCTGTCG	1105	40.921886	8
GTACTTT	63575	40.68544	1
GTGGTAT	2485	39.75734	1