EGAF00004913789 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913789
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7111947
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	15801	0.22217544647056567	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	11041	0.1552458138397263	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	10997	0.1546271365633068	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	10606	0.14912934531148783	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	8656	0.12171069328834987	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	7805	0.10974491232850862	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	7742	0.10885907895545341	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	7428	0.10444397293736864	No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC	7363	0.1035300178699307	No Hit
CTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTGAG	7356	0.10343159193959123	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CAACGCA	3825	44.797516	5
TCTGTCG	1095	42.923954	8
ACGCAGA	4140	41.364845	7
TCAACGC	4190	41.050396	4
GTCTCGC	1035	40.27872	1
CGCAGAG	4355	39.345142	8
GCAGCGC	1190	38.99729	8
ATCAACG	4455	38.47768	3
GGTATCA	1990	37.408897	1
AACGCAG	4825	35.491577	6
TCTCGCT	1230	33.873264	2
GCTCTAG	1305	33.77063	1
CTCGCTC	1230	32.905457	3
GCAGAGT	5215	32.858166	9
CGCTCTG	1205	32.587406	5
GTATCAA	5490	32.5437	1
CTAGCCT	6415	30.152283	4
GTACGGG	6795	29.185877	1
GCCTTTC	5325	28.139748	7
ACGGGAC	795	27.701208	3