FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004913824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004913824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15467900
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC530890.34322047595342614No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC243430.15737753670504723No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC195340.126287343466146No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)