EGAF00004913831 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913831
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7194759
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	16015	0.22259258440762228	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	11373	0.15807339759399863	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	10966	0.15241650206768564	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	10871	0.15109609647800573	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	8813	0.12249194170367625	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	7829	0.10881531959583358	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	7585	0.10542396208128722	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	7565	0.10514598195714409	No Hit
CTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTGAG	7348	0.10212989761019098	No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC	7253	0.10080949202051104	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CAACGCA	4245	40.23935	5
GCAGCGC	1365	39.222572	8
TCTGTCG	1110	38.050606	8
GGTATCA	2200	37.89526	1
TCAACGC	4585	37.124565	4
ACGCAGA	4655	36.80229	7
CGCAGAG	4795	35.85382	8
ATCAACG	4790	35.411476	3
GTCTCGC	1220	33.67975	1
AACGCAG	5275	32.814327	6
TCTCGCT	1345	31.858383	2
GTATCAA	5790	31.471859	1
GCTCTAG	1370	30.86152	1
CTCGCTC	1350	30.419355	3
CGCTCTG	1350	29.538458	5
GCAGAGT	5710	29.489279	9
CTAGCCT	6675	28.35375	4
GCCTTTC	5175	28.276575	7
CTTTCTA	5535	27.626719	9
GTACGGG	7100	27.342537	1