EGAF00004913852 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913852
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6844981
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	60630	0.8857584849395491	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30370	0.4436827509090237	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22610	0.3303150147531454	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17789	0.259883847741871	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	14284	0.20867844629517598	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	11129	0.16258628037097547	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	10765	0.15726851542758116	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	10705	0.1563919607665821	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	8398	0.1226884340511683	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	7998	0.11684473631117458	No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC	7377	0.1077723955698343	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	7139	0.10429539541453804	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	8065	89.82201	1
GTATCAA	23050	68.53256	1
GCGTACT	460	56.889835	1
ATCAACG	28850	54.672325	3
CAACGCA	29105	54.39727	5
TCAACGC	29130	54.39182	4
GCGTAAC	225	52.867317	1
AACGCAG	30475	51.982525	6
GCGTAAG	495	50.46426	1
ACGCAGA	32980	47.996372	7
CGCAGAG	33475	47.33993	8
TATCAAC	34830	45.268497	2
GCAGAGT	35355	44.772175	9
TCTGTCG	1110	44.463753	8
GCTCTAG	1380	43.529343	1
CGTACTT	605	42.27201	2
GTACTTT	60880	41.216843	1
GCAGCGC	1330	40.23851	8
GTCTCGC	1020	37.318108	1
GTGGTAT	2360	36.79431	1