EGAF00004913869 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913869
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8818641
Sequences flagged as poor quality	0
Sequence length	125
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	18381	0.2084334763145478	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	16031	0.18178537940256326	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	13933	0.15799486564880008	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	12964	0.14700677802849668	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	12109	0.13731140659881721	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	10145	0.11504040134982249	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	9908	0.1123529124272096	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	9629	0.10918915964489312	No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC	9518	0.10793046230139088	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	9487	0.10757893421446682	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCAGCGC	1525	59.689644	8
TGCAGCG	1625	55.977345	7
CAACGCA	6580	47.56139	5
GCTCTAG	1525	46.862503	1
CGCAGAG	7030	44.51515	8
GGTATCA	2835	43.90432	1
ACGCAGA	7160	43.676414	7
ATCAACG	7445	41.65148	3
TCAACGC	7570	41.35402	4
TGGTCCT	3810	40.91391	5
AACGCAG	8155	38.345016	6
GCAGAGT	8225	38.267643	9
GTATCAA	8705	37.4909	1
CATGCAG	2640	35.382656	5
CTAGCCT	7490	30.035704	4
GTCGTGC	950	29.46377	1
GCCTTTC	6410	27.917894	7
ACCCGGT	390	27.459038	8
TACGGGT	1665	26.451197	4
TAGCGTG	1005	25.457417	9