EGAF00004913882 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913882
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11159189
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	121063	1.0848727447845896	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	60403	0.5412848550194822	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	35845	0.32121509905424134	No Hit
CCGCCACTCCGGATTCGGGGATCTGAACCCGACTCCCTTTCGATCGGCCG	29124	0.26098670790502787	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	24399	0.21864492123934814	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	21608	0.19363414312635086	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	15912	0.14259100728556529	No Hit
CTCCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACT	14465	0.12962411515747246	No Hit
CCGCCTGGGCGGGATTCTGACTTAGAGGCGTTCAGTCATAATCCCACAGA	13295	0.11913948226882796	No Hit
GCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGGAACGGCGCTCGCCC	12557	0.1125260984467599	No Hit
ACCCAGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGC	12028	0.107785610585142	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	2905	59.362274	4
GCGACAT	3005	57.386826	5
ACCCGAC	22305	56.163486	3
CCCGACT	22640	55.41687	4
CCGACTC	22845	54.79482	5
CGACTCC	22990	54.40789	6
AACCCGA	23190	54.16512	2
CTGCGAC	3330	51.928204	3
GACTCCC	24690	50.66125	7
ACTCCCT	25700	48.722683	8
GCTGCGA	3820	45.783367	2
CTCCCTT	28335	44.275562	9
GAACCCG	29360	42.93452	1
GCTCCCG	14810	40.99158	8
CGGGGCT	15270	39.759586	4
CCGGGGC	15705	38.869713	3
CCCGGGG	15920	38.59924	2
GGCTGCG	4955	36.192158	1
GGCTCCC	17305	35.38567	7
GGGGCTC	17460	35.044643	5