EGAF00004913893 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913893
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8899184
Sequences flagged as poor quality	0
Sequence length	125
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	18666	0.20974956805028416	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	16229	0.18236503481667532	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	14135	0.1588347875490607	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	12819	0.14404691486320542	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	12382	0.13913635227679302	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	10073	0.11319015316460475	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	10023	0.11262830389842483	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	9870	0.11090904514391431	No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC	9458	0.10627940719059187	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	9332	0.10486354703981848	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCAGCGC	1655	53.571648	8
GCTCTAG	1475	51.692707	1
TGCAGCG	1765	50.565483	7
CAACGCA	6655	49.33853	5
GGTATCA	2630	48.2431	1
ACGCAGA	7130	46.14697	7
CGCAGAG	7180	45.829735	8
ATCAACG	7530	43.533653	3
TCAACGC	7600	43.0406	4
TGGTCCT	3845	39.449276	5
GCAGAGT	8470	38.644882	9
AACGCAG	8545	38.64414	6
GTATCAA	9040	38.284153	1
CATGCAG	2635	33.861473	5
CTAGCCT	7630	30.633545	4
GCCTTTC	6580	26.674957	7
GAGTACG	8650	24.636547	12-13
AGCCTTT	7480	24.34011	6
TGTCGGG	1090	24.019993	8
TACGGGT	1585	23.639622	4