EGAF00004913903 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913903
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8873366
Sequences flagged as poor quality	0
Sequence length	125
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	18615	0.209785102969944	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	16015	0.18048393360535336	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	13881	0.15643443536533938	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	12878	0.1451309457989223	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	11968	0.1348755365213156	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	10117	0.11401535786983202	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	10087	0.11367726745408675	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	9823	0.11070207179552834	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	9651	0.10876368674525541	No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC	9515	0.10723101019387682	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCAGCGC	1440	62.381985	8
TGCAGCG	1610	56.16172	7
GCTCTAG	1360	51.23044	1
CAACGCA	6720	48.803955	5
GGTATCA	2900	45.997173	1
CGCAGAG	7190	45.589775	8
ACGCAGA	7195	45.473103	7
ATCAACG	7570	42.85246	3
TGGTCCT	3710	42.675674	5
TCAACGC	7675	42.34304	4
AACGCAG	8260	39.89744	6
GCAGAGT	8280	39.520832	9
GTATCAA	8960	37.41808	1
CATGCAG	2745	33.392662	5
CTAGCCT	7490	27.733927	4
CCAGTAC	2990	25.48085	3
GCCTTTC	6180	25.411959	7
GTCGTGC	1010	25.352932	1
TACGGGT	1580	25.239775	4
TAGCGTG	995	25.114235	9