EGAF00004913928 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913928
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16035422
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	95101	0.5930682709815807	No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	81264	0.5067780567296576	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	53026	0.3306804148964711	No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT	37651	0.23479893450886416	No Hit
ACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCT	25363	0.15816858452493485	No Hit
AGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCCCGAA	20835	0.12993109878866924	No Hit
GAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTAT	19042	0.11874960322216653	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	11850	79.64883	4
GCGACAT	12080	78.36337	5
CTGCGAC	12610	75.048935	3
GCTGCGA	13640	69.41809	2
CGACATC	14005	67.3894	6
GGCTGCG	16180	59.05979	1
GACATCT	21080	45.086643	7
ACATCTG	22240	42.757156	8
CATCTGT	25045	37.968426	9
ACTCGGG	19145	37.08118	1
TTGATCG	13415	35.213226	22-23
CTCGGGA	20465	34.98495	2
TGATCGC	13585	34.667953	24-25
TCGGGAG	21260	33.56425	3
TCGCCAG	14615	32.210667	26-27
GATCGCC	14710	32.1942	24-25
ATTCGGC	15340	30.794645	38-39
TTCGGCT	15475	30.634243	40-41
ATCGCCA	15630	30.362072	26-27
TGATTCG	15695	30.264803	36-37