EGAF00004913932 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913932
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17243260
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	48407	0.2807299779740026	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	42761	0.24798674960535305	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	41132	0.2385395801026024	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	32362	0.18767912796072206	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	32134	0.18635687219238126	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	30432	0.17648634886906536	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	26820	0.15553903380219286	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	26493	0.15364264066075672	No Hit
GGCCCACTAGGCACTCGCATTCCACGCCCGGCTCCACGCCAGCGAGCCGG	20540	0.11911900649877111	No Hit
GCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGGAACGGCGCTCGCCC	18199	0.105542687403658	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	17594	0.1020340701236309	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	4385	57.413002	4
GCGACAT	4660	54.020508	5
CTGCGAC	5280	47.689495	3
ACCCGAC	10495	42.14519	3
GCTGCGA	6305	40.31504	2
CCCGACT	11165	39.86436	4
CCGACTC	11175	39.527935	5
AACCCGA	11620	38.67973	2
CGACTCC	11450	38.53765	6
CTAGGCG	15570	33.434277	7
GACTCCC	13320	33.37656	7
TAGGCGG	15930	32.768433	8
GGCTGCG	8560	30.810112	1
GAACCCG	15500	30.167368	1
TAGAGCC	11615	30.138264	7
CCCTTAG	11680	30.018866	3
ACTCCCT	15245	29.224638	8
GCTAGGC	18265	29.021477	6
GCCCTTA	12205	28.923409	2
TGGCTAG	19495	27.582088	4