FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004913960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004913960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16851472
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC534460.31715923689040343No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC274860.1631074128123644No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC226580.13445709668567826No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)