EGAF00004914045 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914045
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15145852
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	34287	0.2263788131562358	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	24916	0.16450708748507514	No Hit
CCTCTGTCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	17728	0.1170485490020634	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGA	15384	0.10157236449953426	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCCGACC	10155	55.24411	9
TTCCGAC	10460	53.722317	8
TTTCCGA	12415	45.530296	7
TGTCGGG	4115	44.56174	5
GTTTCCG	11665	41.535553	6
CGTTTCC	11220	41.493298	5
CCGTTTC	11590	40.67113	4
GTTCCGT	3070	40.39696	1
CGGGGAT	22000	40.051884	8
TCCGTTT	11350	38.97808	3
TCGGGGA	22815	38.766754	7
GCTCCGT	8100	37.368095	1
TCACCCC	32810	37.295433	9
CTCCGTT	8675	36.97304	2
CTGTCGG	4835	36.46158	4
GTCGGGG	5445	35.505943	6
GTTCACC	34845	35.14331	7
TTCACCC	34970	34.949894	8
ATAGCGC	19665	33.95002	94-95
ACCGGTT	1700	33.542774	3