FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004914056

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004914056
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15254577
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC423380.2775429302300549No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC308190.20203116743256794No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC299800.19653117880620352No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATTTGCGTCC218120.1429865934663413No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATTTGCGTCCCTCC170120.11152062754673565No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)