FastQCFastQC Report
Fri 1 Jul 2022
EGAF00004914074

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004914074
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26861020
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC555060.20664144548494437No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC432330.1609507010530501No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC330430.12301468819873557No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)