EGAF00004914096 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914096
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19175131
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGG	148979	0.7769386295196627	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	103650	0.5405438951108079	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	71733	0.37409392405194	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	68449	0.3569675743023607	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	45247	0.23596709717393846	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	41408	0.2159463734563274	No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	36735	0.1915762661543225	No Hit
CCTCGACCGCTCGCGTCGCATTTGGCCGCCTCCCTACCGCTCCAAGCCCA	31721	0.16542781376565302	No Hit
CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACC	30987	0.16159993900432806	No Hit
CGTACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAA	29413	0.1533913901292252	No Hit
TGGGGGGGATTCTTCTCTAATCTTTCAGAAACTTTGTCTGCGAACACTCT	24411	0.12730551879932397	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	23279	0.1214020389221852	No Hit
AAGAAGTTGGGGGACGCCGACCGCTCGGGGGTCGCGTAACTAGTTAGCAT	22772	0.1187579891892264	No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG	21866	0.1140331192522231	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	9440	74.31309	4
GCGACAT	9580	73.27667	5
TCAGACG	21385	71.42719	5
CTGCGAC	10405	67.78618	3
GCTCGCG	4990	66.91229	9
CAGACGT	22850	66.82694	6
GCTGCGA	10870	64.94551	2
AGACGTG	23650	64.60573	7
CTCGACC	5780	57.53473	2
ACGTGGC	26835	56.937786	9
GACGTGG	27680	55.37121	8
GGCTGCG	12845	55.298214	1
ATCAGAC	27115	55.071857	4
CCTCGAC	6215	53.36031	1
GATCAGA	29585	50.586384	3
AGATCAG	32230	46.519665	2
CAGATCA	34450	43.60906	1
CCCGACT	5785	43.10352	4
CCGACTC	5880	42.326347	5
AACCCGA	6130	41.229782	2