EGAF00004914132 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914132
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18990766
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	100612	0.529794322145826	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	85425	0.4498238775623901	No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	75702	0.3986253108484408	No Hit
ACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCT	42885	0.22582027496942464	No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT	40146	0.21139747601544878	No Hit
AGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCCCGAA	21272	0.11201233273054916	No Hit
GAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTAT	21147	0.11135411810139727	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	13180	76.57372	4
GCGACAT	13490	74.84946	5
CTGCGAC	14830	68.3105	3
GCTGCGA	15655	65.0745	2
CGACATC	15755	64.09049	6
GGCTGCG	19210	53.537197	1
GACATCT	23960	42.321293	7
ACATCTG	25205	40.287342	8
CATCTGT	28350	35.96878	9
TTGATCG	15195	33.636425	22-23
TGATCGC	15420	32.957405	24-25
ACTCGGG	25460	32.394104	1
TGATTCG	16020	31.71848	36-37
ATTCGGC	16055	31.66564	38-39
TTCGGCT	16370	31.134571	40-41
GATCGCC	16510	30.939983	24-25
CTCGGGA	27155	30.348284	2
TCGGCTG	16780	30.302998	40-41
TCGCCAG	17070	30.134216	26-27
TCGGGAG	28005	29.42716	3