EGAF00004914141 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914141
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6606422
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	12252	0.18545590941662524	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	11048	0.16723121835087132	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	10195	0.15431953938152906	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	9837	0.14890056977892116	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8725	0.13206846308031792	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	8302	0.1256656023487449	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	7528	0.11394972952076024	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	6934	0.10495847828067902	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	6682	0.10114400805761425	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	3100	45.52438	1
GCAGCGC	1440	45.030823	8
CAACGCA	5770	41.471798	5
GCTCTAG	1755	41.05496	1
ATCAACG	6055	39.42147	3
TCAACGC	6065	39.356472	4
TGCAGCG	1665	38.944695	7
ACGCAGA	6355	37.911896	7
CGCAGAG	6470	37.146935	8
AACGCAG	6710	35.640694	6
GTATCAA	7185	35.305325	1
GTACTTT	5690	34.639618	1
CTAGCCT	5435	32.418636	4
GCAGAGT	7475	32.07447	9
TGGTCCT	3385	31.653114	5
GCCTTTC	5285	26.339462	7
CTTTCTA	5745	25.474794	9
ACGGGAC	970	25.160236	3
CATGCAG	2715	24.77486	5
GTACACT	2490	24.36932	6