EGAF00004914158 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914158
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16263038
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	107514	0.6610941940860005	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	60069	0.36935903365656525	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	55434	0.3408588235482202	No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT	30287	0.18623211727107813	No Hit
AGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCCCGAA	23862	0.14672535352865804	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	18602	0.11438207301735381	No Hit
ACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCT	17393	0.10694803762986965	No Hit
GAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTAT	16763	0.10307422266368682	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	8865	68.246864	4
CTGCGAC	9715	62.275703	3
GCGACAT	9880	61.282936	5
GCTGCGA	10475	57.58702	2
CGACATC	13720	44.232292	6
GGCTGCG	15115	40.310757	1
ACCCGAC	5200	36.79298	3
TGGCTAG	33075	33.90886	4
ACATCTG	18140	33.658936	8
CCCGACT	5780	33.100952	4
CCGACTC	5910	32.52981	5
CTAGGCG	35390	31.232885	7
GACATCT	19695	30.977905	7
TAGGCGG	35845	30.810585	8
GCTAGGC	36685	30.307142	6
CTGGCTA	37195	30.264952	3
GGCTAGG	37210	30.153337	5
CATCTGT	20355	29.882523	9
GGCTGGC	37360	29.73813	1
GCTGGCT	39475	28.261946	2