EGAF00004914166 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914166
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15090282
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	68420	0.4534043830327359	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	65494	0.4340144206715289	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	44447	0.29454055265501333	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	37640	0.24943205170055802	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	37311	0.2472518406216663	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	34227	0.22681484680007968	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	33558	0.22238153004695338	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	29785	0.19737868384434432	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	28406	0.18824035230090463	No Hit
GCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGGAACGGCGCTCGCCC	26196	0.17359516541837985	No Hit
TGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCA	18843	0.12486844182235958	No Hit
GGCCCACTAGGCACTCGCATTCCACGCCCGGCTCCACGCCAGCGAGCCGG	18838	0.12483530791538554	No Hit
CTCCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACT	16986	0.11256250877220188	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	5995	64.15945	4
GCGACAT	6240	61.7889	5
CTGCGAC	6915	56.15954	3
GCTGCGA	7900	49.169426	2
ACCCGAC	15190	42.802742	3
GAACCCG	15745	42.17007	1
CCGACTC	15830	41.16007	5
CCCGACT	15910	40.98223	4
CGACTCC	16130	40.36714	6
AACCCGA	16765	38.98466	2
GGCTGCG	10240	38.469368	1
GACTCCC	17120	38.16818	7
ACTCCCT	17915	36.44855	8
CTAGGCG	21840	33.017414	7
TAGGCGG	22360	32.29102	8
TGGCTAG	22830	32.193558	4
CTCCCTT	20505	31.867313	9
GCTAGGC	23525	30.810106	6
CCCTTAG	10265	30.698818	3
TAGAGCC	10285	30.279663	7