EGAF00004914178 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914178
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16629450
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	69355	0.417061297878162	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	53907	0.3241658623706737	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	35889	0.2158159169425327	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	34711	0.20873209877656806	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	29045	0.1746600158153156	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	26242	0.15780437717423007	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	22748	0.13679345979572385	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	20832	0.12527173177705817	No Hit
GCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGGAACGGCGCTCGCCC	18639	0.11208428420663341	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	18614	0.11193394850701616	No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT	16780	0.10090532158309505	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGACAT	5530	61.095127	5
TGCGACA	5530	60.843708	4
CTGCGAC	6125	55.235836	3
GCTGCGA	6760	49.92546	2
ACCCGAC	12035	44.97808	3
CCCGACT	12455	43.535778	4
CCGACTC	12490	43.302464	5
CGACTCC	12630	42.823494	6
GAACCCG	13655	41.968452	1
AACCCGA	13395	40.83915	2
GACTCCC	14010	38.803818	7
GGCTGCG	8825	38.75257	1
ACTCCCT	15660	34.626507	8
CTAGGCG	22100	32.735973	7
TAGGCGG	22655	31.913551	8
TGGCTAG	24025	30.652414	4
GCTAGGC	24415	29.726904	6
CGACATC	11385	29.63555	6
GGCTGGC	26030	28.79029	1
GGCTAGG	25800	28.47172	5