EGAF00004914190 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914190
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19405359
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	65594	0.3380200283849425	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	61310	0.31594365247249484	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	38344	0.1975949014908717	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	36364	0.1873915344725135	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	34831	0.17949165485678467	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	34425	0.17739944929645465	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	32909	0.16958717434704507	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	25946	0.1337053336658188	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	23564	0.12143037394979397	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	6390	56.35285	4
GCGACAT	6500	55.11428	5
CTGCGAC	6980	51.855083	3
ACCCGAC	13490	45.725857	3
GCTGCGA	8025	45.172474	2
CCGACTC	14100	43.682133	5
CCCGACT	14220	43.345875	4
CGACTCC	14665	41.906326	6
GAACCCG	15335	41.695225	1
AACCCGA	15350	40.316708	2
GACTCCC	17285	35.742004	7
GGCTGCG	10925	33.722515	1
ACTCCCT	19075	32.31508	8
CTAGGCG	22775	31.094467	7
TAGGCGG	23310	30.341036	8
TGGCTAG	25180	28.840914	4
GCTAGGC	25220	28.116709	6
TCGATCG	11300	27.314108	16-17
GGCTAGG	26640	27.121262	5
CTCCCTT	22880	27.042145	9