EGAF00004914193 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914193
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15724121
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	58598	0.37266312056489515	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	37995	0.24163512860273717	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	23861	0.15174775111435482	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	20573	0.1308372022830402	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	20527	0.13054465810839283	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	19509	0.12407052833032767	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	18723	0.1190718387374404	No Hit
CCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	18163	0.11551043139390749	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	17920	0.11396503499305304	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	15802	0.10049528364733393	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTACGGT	1865	46.565075	2
GTAGCAA	45400	46.561245	9
GCCCCGT	4175	46.375095	1
AGTAGCA	47640	44.29229	8
TAGTAGC	49575	42.21905	7
TTCCGAC	5595	41.979557	8
GCTAGTA	4510	40.61628	5
GTGCTCT	27460	39.39698	6
GGTACGG	2280	39.337624	1
CGACCTA	1080	38.227562	1
GTAGTAG	35310	38.015774	6
GCTCTGA	32280	37.58633	8
CGGTGAA	12315	37.34038	5
GTACACC	9850	36.321957	7
AGTGCTC	21535	35.897617	5
GATAGTA	7705	35.537968	5
GGTGTTA	6560	35.1577	2
GGTAGTA	29030	34.96658	5
CCGTGCT	4180	34.853466	4
GTCCCGT	2295	34.73823	1