EGAF00004914213 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914213
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18325501
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	79719	0.4350167561585356	No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	79419	0.43337969313908525	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	42476	0.23178629604724038	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	39194	0.21387682661445384	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	36722	0.2003874273341831	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	31621	0.17255189912679603	No Hit
CCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	31344	0.17104034427217024	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	31314	0.1708766379702252	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	29352	0.16017024582302009	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	25194	0.13748055237343854	No Hit
TGGTTGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	20728	0.11311014089055464	No Hit
GCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAAACGGCGG	19570	0.10679107763547638	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	19337	0.10551962535703663	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACCTA	1530	54.585518	1
GCTAGTA	6730	54.15093	5
GTACGGT	2785	52.65021	2
CGCGATA	580	49.90783	3
GGTGTTA	9745	49.620277	2
GTAGCAA	81280	49.111084	9
GGTACGG	3065	47.99405	1
GATAGTA	11350	47.954273	5
AGTAGCA	86000	46.30534	8
TAGTAGC	87895	45.004704	7
GCCCCGT	5600	44.825363	1
TGTCGGG	4365	44.463	5
GGTGCTA	8025	44.348923	2
TACGGTG	3375	43.727383	3
TGCTAGT	8565	42.826427	4
GTGCTAG	8605	41.800854	3
GTGATAG	11585	40.30565	3
AATACCG	4480	40.245552	8
TTCCGAC	6490	40.209652	8
GTGCTCT	37550	40.11863	6