EGAF00004914234 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914234
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20861785
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	100182	0.4802177761874164	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	84827	0.4066142949896186	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	72956	0.34971120639964415	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	72546	0.3477458903924089	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	72325	0.3466865371299724	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	38314	0.183656384149295	No Hit
GCTTACCAAAAGTGGCCCACTAGGCACTCGCATTCCACGCCCGGCTCCAC	25405	0.12177769064344206	No Hit
AACACATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACC	22809	0.10933388490006966	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	11190	64.17514	4
GCGACAT	11360	63.298237	5
CTGCGAC	12535	57.45161	3
GCTGCGA	13255	53.549892	2
GGCTGCG	16000	44.632446	1
GCTCGCG	2740	40.388504	9
ACCCGAC	19250	38.693916	3
CCCGACT	19875	37.32665	4
CCGACTC	19860	37.163433	5
CGACTCC	20795	35.538143	6
AACCCGA	20990	35.355446	2
ACCGACT	30300	34.735973	7
CGACTGA	30380	34.691406	9
GGACCGA	30435	34.456394	5
CCGACTG	30685	34.37754	8
GACTCCC	21985	33.7232	7
CTCGACC	3405	32.510715	2
GACCGAC	32500	32.42784	6
GAACCCG	23595	32.078014	1
ACATCTG	23475	30.975761	8