EGAF00004914238 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914238
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7850584
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	70019	0.8918954309641168	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35153	0.4477756049741013	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29514	0.37594655378504327	No Hit
ATGCTAGGGTGAGTGGTAGGAAGTTTTTTCATAGGAGGTGTATGAGTTGG	10998	0.14009148873510557	No Hit
TCCATATAGTCACTCCAGGTTTATGGAGGGTTCTTCTACTATTAGGACTT	10822	0.13784961730235612	No Hit
GGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCATAG	7981	0.10166122673166735	No Hit
GTGTATGCATCGGGGTAGTCCGAGTAACGTCGGGGCATTCCGGATAGGCC	7908	0.10073135960331103	No Hit
GTGTATGAGTTGGTCGTAGCGGAATCGGGGGTATGCTGTTCGAATTCATA	7862	0.1001454159333879	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	10420	88.43719	1
GTATCAA	32130	66.34761	1
ATCAACG	38990	54.45876	3
TCAACGC	39805	53.38791	4
CAACGCA	40085	53.043667	5
AACGCAG	41990	50.689014	6
ACGCAGA	45205	47.0442	7
TATCAAC	45475	46.851196	2
CGCAGAG	45555	46.70531	8
GCAGCGC	2505	45.12848	8
GCAGAGT	48135	44.1525	9
GCTCTAG	2130	43.31954	1
TGCAGCG	2835	39.878475	7
CAGCGCA	3600	34.376816	9
CATGCAG	3550	32.36182	5
GTGGTAT	3850	31.388243	1
TCTGTCG	705	31.226074	8
AGAGTAC	52600	30.648428	10-11
CAGAGTA	51925	29.459839	10-11
TGGTATC	3990	29.093328	2