EGAF00004914254 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914254
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7828962
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	68895	0.880001716702674	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35070	0.44795210399539553	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29840	0.38114886749993165	No Hit
TCCATATAGTCACTCCAGGTTTATGGAGGGTTCTTCTACTATTAGGACTT	10877	0.13893284959104413	No Hit
ATGCTAGGGTGAGTGGTAGGAAGTTTTTTCATAGGAGGTGTATGAGTTGG	10876	0.13892007650567215	No Hit
GTGTATGAGTTGGTCGTAGCGGAATCGGGGGTATGCTGTTCGAATTCATA	7963	0.10171207881708967	No Hit
GTGTATGCATCGGGGTAGTCCGAGTAACGTCGGGGCATTCCGGATAGGCC	7940	0.10141829785353411	No Hit
GGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCATAG	7872	0.10054972804823936	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	10125	89.40003	1
GTATCAA	31105	65.64385	1
ATCAACG	38095	53.488224	3
TCAACGC	38765	52.609806	4
CAACGCA	38940	52.31225	5
AACGCAG	40670	50.13786	6
TATCAAC	44210	46.346237	2
ACGCAGA	43910	46.31459	7
GCAGCGC	2380	45.999176	8
CGCAGAG	44360	45.83135	8
GCAGAGT	47015	43.230537	9
GCTCTAG	1875	42.21375	1
TGCAGCG	2785	38.455326	7
CAGCGCA	3500	32.97941	9
CATGCAG	3390	32.476147	5
TCTGTCG	710	31.006487	8
GTGGTAT	3830	30.76592	1
AGAGTAC	51720	30.1176	10-11
TGGTATC	3905	29.412657	2
CAGAGTA	50865	29.003757	10-11