FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004914272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004914272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23350154
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC2824361.2095680396797381No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC496360.2125724738260827No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC237100.10154108619583409No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)