EGAF00004914280 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914280
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7279527
Sequences flagged as poor quality	0
Sequence length	125
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	64971	0.8925167802798176	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33087	0.45452128963873617	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22209	0.30508850368986884	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19159	0.26319017705408604	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	14001	0.19233392499265406	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	12731	0.1748877365246396	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	11272	0.154845225520834	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	10346	0.14212461881108485	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	9644	0.1324811351067178	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	8624	0.1184692357072101	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	9175	86.923775	1
GCGTAAG	465	69.116325	1
GTATCAA	26945	67.590096	1
GCGTACT	365	65.22393	1
GCGTAAC	140	59.516838	1
GCTCTAG	1550	58.74888	1
ATCAACG	31770	57.340977	3
CAACGCA	32280	56.82181	5
TCAACGC	32405	56.547916	4
AACGCAG	34215	53.64869	6
ACGCAGA	36990	49.50965	7
CGCAGAG	37370	48.990288	8
GCAGCGC	1495	47.359962	8
TATCAAC	38650	47.04371	2
TGCAGCG	1515	46.342022	7
GCAGAGT	40055	45.661766	9
CGTACTT	485	45.4046	2
CGTAAGG	335	44.41555	2
TGGTATC	2795	44.291603	2
GTGGTAT	3030	42.427845	1