EGAF00004914281 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914281
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7279527
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	14706	0.20201862016584318	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	12345	0.1695851942028651	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	10771	0.14796291022754637	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	10016	0.13759135724065588	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	8361	0.11485636360714095	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	7497	0.10298746058638152	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	7351	0.10098183577037353	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	2680	53.556255	1
GCTCTAG	1255	47.929794	1
GCAGCGC	1350	47.153606	8
TGCAGCG	1395	45.61026	7
CAACGCA	6350	45.532497	5
CGCAGAG	6740	43.163223	8
ACGCAGA	6800	42.7615	7
TCAACGC	6875	42.070507	4
ATCAACG	6830	42.001755	3
GTATCAA	7695	40.013805	1
GTCTCGC	895	38.595165	1
CTCGCTC	915	37.726627	3
GCAGAGT	7740	37.589424	9
AACGCAG	7870	36.94615	6
TCTGTCG	820	36.27614	8
TGGTCCT	3005	34.843925	5
TCTCGCT	1035	33.352528	2
GCCTTTC	5100	30.781284	7
CGCTCTG	1145	30.13571	5
CTAGCCT	7125	28.399342	4