FastQCFastQC Report
Thu 16 Jun 2022
EGAF00004914284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004914284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23076159
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC462750.20053163960258724No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC359260.15568448804673254No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT262280.11365842989728056No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)